Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SOCS5P5-201ENST00000402732 1586 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RNU6-386P-201ENST00000362650 107 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RNY4P24-201ENST00000362735 96 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RNU6-670P-201ENST00000364312 104 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RN7SKP15-201ENST00000364742 309 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RN7SKP133-201ENST00000364845 340 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RNU11-6P-201ENST00000391127 133 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 BX119321.1-201ENST00000428912 797 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 USP9YP9-201ENST00000429406 715 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 MTCO3P18-201ENST00000440206 761 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 USP9YP8-201ENST00000441913 500 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RN7SL55P-201ENST00000464534 297 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RPS16P9-201ENST00000477220 427 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 Vault.2-201ENST00000516519 98 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AP000445.1-201ENST00000526692 741 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 OR5AK3P-201ENST00000527486 1297 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC010680.3-201ENST00000604215 520 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 U1.22-201ENST00000605806 164 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AL390208.1-201ENST00000605885 644 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC011373.1-201ENST00000607270 237 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AP000255.1-201ENST00000610276 676 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RNVU1-19-201ENST00000613023 167 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC007014.2-201ENST00000615581 479 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AL122125.1-201ENST00000616999 600 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 uc_338.37-201ENST00000620113 186 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AL589666.2-201ENST00000624603 618 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC010653.3-201ENST00000635332 232 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC127070.5-201ENST00000623177 2104 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 AC138409.1-201ENST00000505001 3598 ntBASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RSPO4Q2I0M5 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 AL158206.1-201ENST00000563205 1965 ntBASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 OR56A1-201ENST00000316650 1071 ntBASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 RNVU1-15-201ENST00000384476 165 ntBASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RSPO4Q2I0M5 LDHAP5-201ENST00000394996 622 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms