RNA–Protein interactions for RNA: ENST00000429406.1

USP9YP9-201, Transcript of USP9Y pseudogene 9, humanhuman

BASIC

Gene USP9YP9, Length 715 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP9-201ENST00000429406 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
USP9YP9-201ENST00000429406 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
USP9YP9-201ENST00000429406 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
USP9YP9-201ENST00000429406 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
USP9YP9-201ENST00000429406 FOXD1Q16676 465 aa20.03■□□□□ 0.8
USP9YP9-201ENST00000429406 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
USP9YP9-201ENST00000429406 MSH5O43196 834 aa18.9■□□□□ 0.62
USP9YP9-201ENST00000429406 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
USP9YP9-201ENST00000429406 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
USP9YP9-201ENST00000429406 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
USP9YP9-201ENST00000429406 ADRA2BP18089 450 aa18.4■□□□□ 0.54
USP9YP9-201ENST00000429406 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
USP9YP9-201ENST00000429406 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
USP9YP9-201ENST00000429406 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
USP9YP9-201ENST00000429406 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
USP9YP9-201ENST00000429406 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
USP9YP9-201ENST00000429406 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
USP9YP9-201ENST00000429406 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
USP9YP9-201ENST00000429406 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
USP9YP9-201ENST00000429406 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
USP9YP9-201ENST00000429406 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
USP9YP9-201ENST00000429406 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
USP9YP9-201ENST00000429406 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
USP9YP9-201ENST00000429406 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
USP9YP9-201ENST00000429406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
USP9YP9-201ENST00000429406 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
USP9YP9-201ENST00000429406 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
USP9YP9-201ENST00000429406 CAPN15O75808 1086 aa14.96□□□□□ -0.01
USP9YP9-201ENST00000429406 DSG3P32926 999 aa14.95□□□□□ -0.02
USP9YP9-201ENST00000429406 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
USP9YP9-201ENST00000429406 POTEHQ6S545 545 aa14.82□□□□□ -0.04
USP9YP9-201ENST00000429406 KCNA4P22459 653 aa14.74□□□□□ -0.05
USP9YP9-201ENST00000429406 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
USP9YP9-201ENST00000429406 APLP2Q06481 763 aa14.67□□□□□ -0.06
USP9YP9-201ENST00000429406 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
USP9YP9-201ENST00000429406 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
USP9YP9-201ENST00000429406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
USP9YP9-201ENST00000429406 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
USP9YP9-201ENST00000429406 ABCB7O75027 752 aa14.56□□□□□ -0.08
USP9YP9-201ENST00000429406 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
USP9YP9-201ENST00000429406 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
USP9YP9-201ENST00000429406 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
USP9YP9-201ENST00000429406 POLA2Q14181 598 aa14.17□□□□□ -0.14
USP9YP9-201ENST00000429406 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
USP9YP9-201ENST00000429406 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
USP9YP9-201ENST00000429406 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
USP9YP9-201ENST00000429406 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
USP9YP9-201ENST00000429406 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
USP9YP9-201ENST00000429406 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
USP9YP9-201ENST00000429406 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
USP9YP9-201ENST00000429406 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
USP9YP9-201ENST00000429406 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
USP9YP9-201ENST00000429406 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
USP9YP9-201ENST00000429406 PITPNM1O00562 1244 aa13.59□□□□□ -0.23
USP9YP9-201ENST00000429406 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP9YP9-201ENST00000429406 HAX1O00165 279 aa13.54□□□□□ -0.24
USP9YP9-201ENST00000429406 ZBTB22O15209 634 aa13.53□□□□□ -0.24
USP9YP9-201ENST00000429406 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
USP9YP9-201ENST00000429406 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
USP9YP9-201ENST00000429406 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
USP9YP9-201ENST00000429406 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
USP9YP9-201ENST00000429406 FBLN2P98095 1184 aa13.4□□□□□ -0.26
USP9YP9-201ENST00000429406 EVX2Q03828 476 aa13.31□□□□□ -0.28
USP9YP9-201ENST00000429406 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
USP9YP9-201ENST00000429406 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
USP9YP9-201ENST00000429406 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
USP9YP9-201ENST00000429406 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
USP9YP9-201ENST00000429406 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
USP9YP9-201ENST00000429406 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
USP9YP9-201ENST00000429406 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
USP9YP9-201ENST00000429406 GABBR2O75899 941 aa13.03□□□□□ -0.32
USP9YP9-201ENST00000429406 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
USP9YP9-201ENST00000429406 PRR29P0C7W0 189 aa13□□□□□ -0.33
USP9YP9-201ENST00000429406 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP9YP9-201ENST00000429406 LHX8Q68G74 356 aa12.89□□□□□ -0.35
USP9YP9-201ENST00000429406 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
USP9YP9-201ENST00000429406 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
USP9YP9-201ENST00000429406 CLCN6P51797 869 aa12.77□□□□□ -0.37
USP9YP9-201ENST00000429406 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
USP9YP9-201ENST00000429406 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
USP9YP9-201ENST00000429406 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
USP9YP9-201ENST00000429406 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
USP9YP9-201ENST00000429406 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
USP9YP9-201ENST00000429406 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
USP9YP9-201ENST00000429406 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
USP9YP9-201ENST00000429406 NISCHQ9Y2I1 1504 aa12.53□□□□□ -0.4
USP9YP9-201ENST00000429406 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
USP9YP9-201ENST00000429406 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
USP9YP9-201ENST00000429406 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
USP9YP9-201ENST00000429406 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP9YP9-201ENST00000429406 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
USP9YP9-201ENST00000429406 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
USP9YP9-201ENST00000429406 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
USP9YP9-201ENST00000429406 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
USP9YP9-201ENST00000429406 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
USP9YP9-201ENST00000429406 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
USP9YP9-201ENST00000429406 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
USP9YP9-201ENST00000429406 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
USP9YP9-201ENST00000429406 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
USP9YP9-201ENST00000429406 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms