Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 RNA5SP77-201ENST00000365394 120 ntBASIC6.91□□□□□ -1.3
CDH8P55286 AL023284.3-201ENST00000407767 334 ntBASIC6.91□□□□□ -1.3
CDH8P55286 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.91□□□□□ -1.3
CDH8P55286 RPL24P2-201ENST00000421023 475 ntBASIC6.91□□□□□ -1.3
CDH8P55286 CYCSP52-201ENST00000422857 310 ntBASIC6.91□□□□□ -1.3
CDH8P55286 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.91□□□□□ -1.3
CDH8P55286 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 GTF2IP14-201ENST00000441415 586 ntBASIC6.91□□□□□ -1.3
CDH8P55286 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.91□□□□□ -1.3
CDH8P55286 MTND4LP12-201ENST00000448237 295 ntBASIC6.91□□□□□ -1.3
CDH8P55286 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 RN7SL39P-201ENST00000462264 297 ntBASIC6.91□□□□□ -1.3
CDH8P55286 RPL29P23-201ENST00000486188 442 ntBASIC6.91□□□□□ -1.3
CDH8P55286 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.91□□□□□ -1.3
CDH8P55286 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.91□□□□□ -1.3
CDH8P55286 RN7SKP183-201ENST00000517169 324 ntBASIC6.91□□□□□ -1.3
CDH8P55286 AC135983.3-201ENST00000528049 1226 ntBASIC6.91□□□□□ -1.3
CDH8P55286 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 RPL3P13-201ENST00000550415 216 ntBASIC6.91□□□□□ -1.3
CDH8P55286 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 TPRX1P1-201ENST00000557620 319 ntBASIC6.91□□□□□ -1.3
CDH8P55286 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 AC011500.1-201ENST00000601963 469 ntBASIC6.91□□□□□ -1.3
CDH8P55286 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.91□□□□□ -1.3
CDH8P55286 AC069542.2-201ENST00000624816 216 ntBASIC6.91□□□□□ -1.3
CDH8P55286 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 AC107980.1-201ENST00000558671 3355 ntBASIC6.91□□□□□ -1.3
CDH8P55286 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.91□□□□□ -1.3
CDH8P55286 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 AL353743.3-201ENST00000442109 1468 ntBASIC6.91□□□□□ -1.3
CDH8P55286 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CDH8P55286 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDH8P55286 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.9□□□□□ -1.3
CDH8P55286 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
CDH8P55286 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.9□□□□□ -1.3
CDH8P55286 AL391419.1-201ENST00000398901 1275 ntBASIC6.9□□□□□ -1.3
CDH8P55286 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.9□□□□□ -1.3
CDH8P55286 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.9□□□□□ -1.3
CDH8P55286 NFYAP1-201ENST00000431953 972 ntBASIC6.9□□□□□ -1.3
CDH8P55286 AC003989.1-201ENST00000434569 565 ntBASIC6.9□□□□□ -1.3
CDH8P55286 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.9□□□□□ -1.3
CDH8P55286 AC011742.2-201ENST00000443818 352 ntBASIC6.9□□□□□ -1.3
CDH8P55286 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.9□□□□□ -1.3
CDH8P55286 OR9A1P-202ENST00000484361 945 ntBASIC6.9□□□□□ -1.3
CDH8P55286 RNA5SP418-201ENST00000515951 117 ntBASIC6.9□□□□□ -1.3
CDH8P55286 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.9□□□□□ -1.3
CDH8P55286 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.9□□□□□ -1.3
CDH8P55286 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.9□□□□□ -1.3
CDH8P55286 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.9□□□□□ -1.3
CDH8P55286 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.9□□□□□ -1.3
CDH8P55286 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.9□□□□□ -1.3
CDH8P55286 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.9□□□□□ -1.3
CDH8P55286 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.9□□□□□ -1.3
CDH8P55286 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.9□□□□□ -1.3
CDH8P55286 AC097467.4-201ENST00000605504 141 ntBASIC6.9□□□□□ -1.3
CDH8P55286 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.9□□□□□ -1.3
CDH8P55286 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.9□□□□□ -1.3
CDH8P55286 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.9□□□□□ -1.3
CDH8P55286 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDH8P55286 AC006213.6-201ENST00000623722 4179 ntBASIC6.9□□□□□ -1.31
CDH8P55286 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDH8P55286 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.9□□□□□ -1.31
CDH8P55286 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDH8P55286 AC073342.2-201ENST00000595842 1800 ntBASIC6.9□□□□□ -1.31
CDH8P55286 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDH8P55286 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.89□□□□□ -1.31
CDH8P55286 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CDH8P55286 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDH8P55286 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
CDH8P55286 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.89□□□□□ -1.31
CDH8P55286 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.89□□□□□ -1.31
CDH8P55286 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDH8P55286 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CDH8P55286 AC005618.1-201ENST00000606901 3148 ntBASIC6.89□□□□□ -1.31
CDH8P55286 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms