Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.93□□□□□ -1.46
ZIC3O60481 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.93□□□□□ -1.46
ZIC3O60481 AC004232.2-201ENST00000574245 821 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.93□□□□□ -1.46
ZIC3O60481 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.93□□□□□ -1.46
ZIC3O60481 BUB1P1-201ENST00000603541 607 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.93□□□□□ -1.46
ZIC3O60481 AC025171.4-201ENST00000607250 1047 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 AL589743.6-201ENST00000611025 117 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 SNX18P10-201ENST00000625014 519 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 AC004808.2-201ENST00000627965 773 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 AC022726.2-201ENST00000634673 547 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 CASC19-228ENST00000641414 1684 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
ZIC3O60481 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.93□□□□□ -1.46
ZIC3O60481 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ZIC3O60481 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.93□□□□□ -1.46
ZIC3O60481 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 RNF19BPY-201ENST00000458209 1550 ntBASIC5.93□□□□□ -1.46
ZIC3O60481 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ZIC3O60481 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 MAPK10-344ENST00000641718 3746 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ZIC3O60481 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 AP002833.3-201ENST00000625075 2265 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 RNU1-84P-201ENST00000365447 164 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 RNU1-46P-201ENST00000384425 164 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 TRAV35-201ENST00000390462 330 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 Z68868.1-201ENST00000429048 544 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 ARMC4P1-201ENST00000438905 707 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AC114878.1-201ENST00000441166 358 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AC245291.3-201ENST00000443400 292 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.92□□□□□ -1.46
ZIC3O60481 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC018645.1-201ENST00000505003 109 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 TDGP1-201ENST00000543961 1229 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ZIC3O60481 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC004805.3-201ENST00000603178 310 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AC022387.2-201ENST00000604050 448 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AC020765.1-201ENST00000604296 328 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.92□□□□□ -1.46
ZIC3O60481 AL445647.2-201ENST00000615170 130 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 AC089999.3-201ENST00000622440 577 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
ZIC3O60481 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 AC092646.2-201ENST00000431242 2095 ntBASIC5.92□□□□□ -1.46
ZIC3O60481 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ZIC3O60481 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZIC3O60481 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms