Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 RNA5SP178-201ENST00000410380 128 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 RN7SKP278-201ENST00000410504 342 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 RN7SL717P-201ENST00000478343 297 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC083906.1-201ENST00000509298 406 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AP001858.2-201ENST00000536213 601 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 RPA2P1-201ENST00000556557 721 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AL513218.1-201ENST00000606527 391 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC010998.3-201ENST00000613871 631 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC125238.2-201ENST00000430003 1440 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.76□□□□□ -1.17
SNED1Q8TER0 Z68868.1-201ENST00000429048 544 ntBASIC7.76□□□□□ -1.17
SNED1Q8TER0 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.76□□□□□ -1.17
SNED1Q8TER0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 NDUFS5P5-201ENST00000437256 321 ntBASIC7.76□□□□□ -1.17
SNED1Q8TER0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC005229.3-201ENST00000603438 323 ntBASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNED1Q8TER0 AC073488.3-201ENST00000631611 778 ntBASIC7.76□□□□□ -1.17
SNED1Q8TER0 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SNED1Q8TER0 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 AC007485.2-201ENST00000623493 1667 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 MIR1203-201ENST00000408812 85 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 PCBP2P1-201ENST00000437262 977 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 AC098847.1-201ENST00000473094 348 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 RN7SL561P-201ENST00000488553 281 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 AC090236.2-201ENST00000587933 1101 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms