RNA–Protein interactions for RNA: ENST00000410504.1

RN7SKP278-201, Transcript of RNA, 7SK small nuclear pseudogene 278, humanhuman

BASIC

Gene RN7SKP278, Length 342 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP278-201ENST00000410504 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
RN7SKP278-201ENST00000410504 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
RN7SKP278-201ENST00000410504 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
RN7SKP278-201ENST00000410504 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
RN7SKP278-201ENST00000410504 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
RN7SKP278-201ENST00000410504 FOXD1Q16676 465 aa19.83■□□□□ 0.77
RN7SKP278-201ENST00000410504 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
RN7SKP278-201ENST00000410504 ADRA2BP18089 450 aa19.01■□□□□ 0.63
RN7SKP278-201ENST00000410504 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
RN7SKP278-201ENST00000410504 MSH5O43196 834 aa18.36■□□□□ 0.53
RN7SKP278-201ENST00000410504 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
RN7SKP278-201ENST00000410504 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
RN7SKP278-201ENST00000410504 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
RN7SKP278-201ENST00000410504 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
RN7SKP278-201ENST00000410504 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
RN7SKP278-201ENST00000410504 KCNA4P22459 653 aa17.08■□□□□ 0.32
RN7SKP278-201ENST00000410504 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
RN7SKP278-201ENST00000410504 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
RN7SKP278-201ENST00000410504 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
RN7SKP278-201ENST00000410504 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
RN7SKP278-201ENST00000410504 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
RN7SKP278-201ENST00000410504 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
RN7SKP278-201ENST00000410504 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
RN7SKP278-201ENST00000410504 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
RN7SKP278-201ENST00000410504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
RN7SKP278-201ENST00000410504 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
RN7SKP278-201ENST00000410504 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
RN7SKP278-201ENST00000410504 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
RN7SKP278-201ENST00000410504 ZBTB22O15209 634 aa15.71■□□□□ 0.11
RN7SKP278-201ENST00000410504 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
RN7SKP278-201ENST00000410504 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
RN7SKP278-201ENST00000410504 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
RN7SKP278-201ENST00000410504 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
RN7SKP278-201ENST00000410504 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
RN7SKP278-201ENST00000410504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
RN7SKP278-201ENST00000410504 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
RN7SKP278-201ENST00000410504 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
RN7SKP278-201ENST00000410504 APLP2Q06481 763 aa15.35■□□□□ 0.05
RN7SKP278-201ENST00000410504 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
RN7SKP278-201ENST00000410504 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
RN7SKP278-201ENST00000410504 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
RN7SKP278-201ENST00000410504 CAPN15O75808 1086 aa15.14■□□□□ 0.01
RN7SKP278-201ENST00000410504 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
RN7SKP278-201ENST00000410504 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
RN7SKP278-201ENST00000410504 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
RN7SKP278-201ENST00000410504 DSG3P32926 999 aa14.92□□□□□ -0.02
RN7SKP278-201ENST00000410504 ABCB7O75027 752 aa14.84□□□□□ -0.03
RN7SKP278-201ENST00000410504 POLA2Q14181 598 aa14.8□□□□□ -0.04
RN7SKP278-201ENST00000410504 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
RN7SKP278-201ENST00000410504 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
RN7SKP278-201ENST00000410504 FBLN2P98095 1184 aa14.53□□□□□ -0.08
RN7SKP278-201ENST00000410504 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP278-201ENST00000410504 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
RN7SKP278-201ENST00000410504 ABCC9O60706 1549 aa14.28□□□□□ -0.12
RN7SKP278-201ENST00000410504 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
RN7SKP278-201ENST00000410504 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP278-201ENST00000410504 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
RN7SKP278-201ENST00000410504 FKBP8Q14318 412 aa14.1□□□□□ -0.15
RN7SKP278-201ENST00000410504 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
RN7SKP278-201ENST00000410504 PROM2Q8N271 834 aa13.94□□□□□ -0.18
RN7SKP278-201ENST00000410504 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RN7SKP278-201ENST00000410504 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
RN7SKP278-201ENST00000410504 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
RN7SKP278-201ENST00000410504 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
RN7SKP278-201ENST00000410504 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
RN7SKP278-201ENST00000410504 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
RN7SKP278-201ENST00000410504 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
RN7SKP278-201ENST00000410504 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
RN7SKP278-201ENST00000410504 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
RN7SKP278-201ENST00000410504 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
RN7SKP278-201ENST00000410504 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
RN7SKP278-201ENST00000410504 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP278-201ENST00000410504 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
RN7SKP278-201ENST00000410504 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
RN7SKP278-201ENST00000410504 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
RN7SKP278-201ENST00000410504 MIER1Q8N108 512 aa13.39□□□□□ -0.27
RN7SKP278-201ENST00000410504 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
RN7SKP278-201ENST00000410504 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
RN7SKP278-201ENST00000410504 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
RN7SKP278-201ENST00000410504 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
RN7SKP278-201ENST00000410504 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
RN7SKP278-201ENST00000410504 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
RN7SKP278-201ENST00000410504 POTEHQ6S545 545 aa13.26□□□□□ -0.29
RN7SKP278-201ENST00000410504 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP278-201ENST00000410504 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP278-201ENST00000410504 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
RN7SKP278-201ENST00000410504 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
RN7SKP278-201ENST00000410504 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
RN7SKP278-201ENST00000410504 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
RN7SKP278-201ENST00000410504 NUBP1P53384 320 aa13.08□□□□□ -0.32
RN7SKP278-201ENST00000410504 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
RN7SKP278-201ENST00000410504 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
RN7SKP278-201ENST00000410504 HAX1O00165 279 aa13.01□□□□□ -0.33
RN7SKP278-201ENST00000410504 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
RN7SKP278-201ENST00000410504 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
RN7SKP278-201ENST00000410504 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms