RNA–Protein interactions for RNA: ENST00000410504.1

RN7SKP278-201, Transcript of RNA, 7SK small nuclear pseudogene 278, humanhuman

BASIC

Gene RN7SKP278, Length 342 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP278-201ENST00000410504 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
RN7SKP278-201ENST00000410504 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
RN7SKP278-201ENST00000410504 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
RN7SKP278-201ENST00000410504 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
RN7SKP278-201ENST00000410504 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
RN7SKP278-201ENST00000410504 FOXD1Q16676 465 aa19.83■□□□□ 0.77
RN7SKP278-201ENST00000410504 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
RN7SKP278-201ENST00000410504 ADRA2BP18089 450 aa19.01■□□□□ 0.63
RN7SKP278-201ENST00000410504 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
RN7SKP278-201ENST00000410504 MSH5O43196 834 aa18.36■□□□□ 0.53
RN7SKP278-201ENST00000410504 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
RN7SKP278-201ENST00000410504 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
RN7SKP278-201ENST00000410504 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
RN7SKP278-201ENST00000410504 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
RN7SKP278-201ENST00000410504 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
RN7SKP278-201ENST00000410504 KCNA4P22459 653 aa17.08■□□□□ 0.32
RN7SKP278-201ENST00000410504 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
RN7SKP278-201ENST00000410504 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
RN7SKP278-201ENST00000410504 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
RN7SKP278-201ENST00000410504 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
RN7SKP278-201ENST00000410504 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
RN7SKP278-201ENST00000410504 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
RN7SKP278-201ENST00000410504 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
RN7SKP278-201ENST00000410504 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
RN7SKP278-201ENST00000410504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
RN7SKP278-201ENST00000410504 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
RN7SKP278-201ENST00000410504 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
RN7SKP278-201ENST00000410504 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
RN7SKP278-201ENST00000410504 ZBTB22O15209 634 aa15.71■□□□□ 0.11
RN7SKP278-201ENST00000410504 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
RN7SKP278-201ENST00000410504 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
RN7SKP278-201ENST00000410504 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
RN7SKP278-201ENST00000410504 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
RN7SKP278-201ENST00000410504 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
RN7SKP278-201ENST00000410504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
RN7SKP278-201ENST00000410504 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
RN7SKP278-201ENST00000410504 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
RN7SKP278-201ENST00000410504 APLP2Q06481 763 aa15.35■□□□□ 0.05
RN7SKP278-201ENST00000410504 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
RN7SKP278-201ENST00000410504 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
RN7SKP278-201ENST00000410504 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
RN7SKP278-201ENST00000410504 CAPN15O75808 1086 aa15.14■□□□□ 0.01
RN7SKP278-201ENST00000410504 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
RN7SKP278-201ENST00000410504 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
RN7SKP278-201ENST00000410504 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
RN7SKP278-201ENST00000410504 DSG3P32926 999 aa14.92□□□□□ -0.02
RN7SKP278-201ENST00000410504 ABCB7O75027 752 aa14.84□□□□□ -0.03
RN7SKP278-201ENST00000410504 POLA2Q14181 598 aa14.8□□□□□ -0.04
RN7SKP278-201ENST00000410504 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
RN7SKP278-201ENST00000410504 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
RN7SKP278-201ENST00000410504 FBLN2P98095 1184 aa14.53□□□□□ -0.08
RN7SKP278-201ENST00000410504 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP278-201ENST00000410504 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
RN7SKP278-201ENST00000410504 ABCC9O60706 1549 aa14.28□□□□□ -0.12
RN7SKP278-201ENST00000410504 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
RN7SKP278-201ENST00000410504 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
RN7SKP278-201ENST00000410504 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP278-201ENST00000410504 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
RN7SKP278-201ENST00000410504 FKBP8Q14318 412 aa14.1□□□□□ -0.15
RN7SKP278-201ENST00000410504 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
RN7SKP278-201ENST00000410504 PROM2Q8N271 834 aa13.94□□□□□ -0.18
RN7SKP278-201ENST00000410504 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RN7SKP278-201ENST00000410504 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
RN7SKP278-201ENST00000410504 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
RN7SKP278-201ENST00000410504 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
RN7SKP278-201ENST00000410504 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
RN7SKP278-201ENST00000410504 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
RN7SKP278-201ENST00000410504 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
RN7SKP278-201ENST00000410504 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
RN7SKP278-201ENST00000410504 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
RN7SKP278-201ENST00000410504 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
RN7SKP278-201ENST00000410504 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
RN7SKP278-201ENST00000410504 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP278-201ENST00000410504 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
RN7SKP278-201ENST00000410504 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
RN7SKP278-201ENST00000410504 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
RN7SKP278-201ENST00000410504 MIER1Q8N108 512 aa13.39□□□□□ -0.27
RN7SKP278-201ENST00000410504 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
RN7SKP278-201ENST00000410504 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
RN7SKP278-201ENST00000410504 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
RN7SKP278-201ENST00000410504 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
RN7SKP278-201ENST00000410504 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
RN7SKP278-201ENST00000410504 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
RN7SKP278-201ENST00000410504 POTEHQ6S545 545 aa13.26□□□□□ -0.29
RN7SKP278-201ENST00000410504 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP278-201ENST00000410504 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP278-201ENST00000410504 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
RN7SKP278-201ENST00000410504 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
RN7SKP278-201ENST00000410504 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
RN7SKP278-201ENST00000410504 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
RN7SKP278-201ENST00000410504 NUBP1P53384 320 aa13.08□□□□□ -0.32
RN7SKP278-201ENST00000410504 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
RN7SKP278-201ENST00000410504 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
RN7SKP278-201ENST00000410504 HAX1O00165 279 aa13.01□□□□□ -0.33
RN7SKP278-201ENST00000410504 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
RN7SKP278-201ENST00000410504 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
RN7SKP278-201ENST00000410504 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms