Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 AL645937.1-201ENST00000641739 1652 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 HSPD1P11-201ENST00000508643 1702 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 CARF-201ENST00000320443 5209 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 AC096745.2-201ENST00000627783 1914 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 AC116456.2-201ENST00000623018 2209 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 CU634019.3-201ENST00000623962 2456 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 FP236315.2-201ENST00000624506 2456 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 FP671120.2-201ENST00000624806 2456 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 AC011330.1-201ENST00000510070 3235 ntBASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CNTNAP3Q9BZ76 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 IPO7P2-201ENST00000451446 1750 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 NNT-208ENST00000512996 4288 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RNA5SP429-201ENST00000363688 109 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AL356432.2-201ENST00000407841 422 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RN7SKP154-201ENST00000410136 290 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RNU4-74P-201ENST00000411280 161 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 PAICSP7-201ENST00000419829 962 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 GTF3AP5-201ENST00000442645 697 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ARMC8P1-201ENST00000443069 1289 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 GDI2P2-201ENST00000445131 608 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 DPPA3P1-201ENST00000448050 469 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC108463.1-201ENST00000450258 347 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AURKAPS1-201ENST00000451805 1212 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC023245.1-201ENST00000468501 517 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RPL12P21-201ENST00000472214 518 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC013828.1-201ENST00000481845 158 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AF305872.1-201ENST00000485217 471 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RN7SL653P-201ENST00000494134 293 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 HMGN1P12-201ENST00000499125 195 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC093824.1-201ENST00000508796 343 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC018653.2-201ENST00000540190 238 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC121758.1-202ENST00000556917 658 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC106734.1-201ENST00000568646 663 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC096708.2-201ENST00000577676 512 ntBASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTNAP3Q9BZ76 AC068726.1-201ENST00000610993 341 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 282.9 ms