Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC010680.2-201ENST00000603521 2117 ntBASIC8.6□□□□□ -1.03
HLA-CQ95604 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.6□□□□□ -1.03
HLA-CQ95604 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
HLA-CQ95604 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CR383658.2-201ENST00000547576 1525 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 ZNF812P-201ENST00000457674 1694 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC009135.2-201ENST00000624136 1768 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC092646.2-201ENST00000431242 2095 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 ARMCX7P-201ENST00000372828 562 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HLA-CQ95604 RNU6-1227P-201ENST00000383981 107 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 Y_RNA.460-201ENST00000384255 102 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HLA-CQ95604 FAT1P1-201ENST00000406588 507 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.59□□□□□ -1.03
HLA-CQ95604 RN7SKP251-201ENST00000410830 314 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 LINC01347-201ENST00000417964 355 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AL513174.1-201ENST00000423182 629 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 ZYG11AP1-201ENST00000430329 837 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AL512593.1-201ENST00000444758 779 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 OR6C5P-201ENST00000452388 923 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC007000.1-201ENST00000453064 794 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HLA-CQ95604 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 RN7SL464P-201ENST00000492743 297 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 MRPS5P3-201ENST00000515577 166 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AP000445.1-201ENST00000526692 741 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AL049869.4-201ENST00000555669 178 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 FRG2IP-201ENST00000563581 781 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC004890.3-201ENST00000605566 1095 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AL121655.1-201ENST00000605811 308 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AC113554.1-201ENST00000606284 490 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AC009233.1-201ENST00000616477 371 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 Six3os1_2.1-201ENST00000616963 217 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AL158209.2-201ENST00000619266 216 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AC069209.1-201ENST00000619282 651 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HLA-CQ95604 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 VN2R3P-201ENST00000422626 1412 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
HLA-CQ95604 GALC-203ENST00000393569 2547 ntTSL 2 BASIC8.59□□□□□ -1.03
HLA-CQ95604 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-CQ95604 ZNF300P1-201ENST00000356555 1822 ntBASIC8.59□□□□□ -1.03
HLA-CQ95604 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms