Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS13CQ709C8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS13CQ709C8 AC096537.2-201ENST00000413707 714 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS13CQ709C8 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 LRRC37A14P-201ENST00000452297 462 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 RN7SL172P-201ENST00000460535 303 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 AC092824.1-201ENST00000483524 576 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 BX510359.5-201ENST00000515651 304 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS13CQ709C8 SETP3-201ENST00000581726 813 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS13CQ709C8 RPSAP73-201ENST00000614820 330 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 AC021766.1-201ENST00000624404 741 ntBASIC5.04□□□□□ -1.6
VPS13CQ709C8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS13CQ709C8 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS13CQ709C8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS13CQ709C8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 ACTR3C-206ENST00000613959 5142 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC127526.2-201ENST00000426436 775 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 RN7SL326P-201ENST00000477493 296 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 HMGN2P36-201ENST00000529541 409 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AL121612.2-201ENST00000612261 482 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC007485.2-201ENST00000623493 1667 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 AL662795.2-201ENST00000624252 3706 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC027088.4-201ENST00000611559 1947 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 ARHGAP42P2-201ENST00000416089 2140 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 RNU105B-201ENST00000364478 208 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 MIR433-201ENST00000384837 93 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC010327.2-201ENST00000587647 488 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC034229.6-201ENST00000623704 224 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS13CQ709C8 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AL596448.1-201ENST00000415024 392 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AL445466.1-201ENST00000448432 357 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC093166.4-201ENST00000457867 318 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 SETP21-201ENST00000514799 892 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 RNA5SP228-201ENST00000516232 133 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS13CQ709C8 AC096861.1-201ENST00000616652 240 ntBASIC5.03□□□□□ -1.6
VPS13CQ709C8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.03□□□□□ -1.61
VPS13CQ709C8 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AL121768.1-201ENST00000613917 2544 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 RNVU1-6-201ENST00000364688 164 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC073594.1-201ENST00000462065 364 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 RN7SL561P-201ENST00000488553 281 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC018552.1-201ENST00000562099 811 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms