Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4B1Q9Y6B7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
AP4B1Q9Y6B7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4B1Q9Y6B7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4B1Q9Y6B7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19■□□□□ 0.63
AP4B1Q9Y6B7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
AP4B1Q9Y6B7 AC120498.9-201ENST00000339021 3867 ntBASIC19■□□□□ 0.63
AP4B1Q9Y6B7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 AC004911.1-201ENST00000416316 871 ntBASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4B1Q9Y6B7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 UBE2DNL-204ENST00000602536 740 ntBASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 BID-214ENST00000617586 542 ntTSL 5 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP4B1Q9Y6B7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 MYCNOS-205ENST00000641950 531 ntBASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 AC011484.1-201ENST00000377652 1995 ntBASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
AP4B1Q9Y6B7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 AC005332.8-201ENST00000622750 2735 ntBASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
AP4B1Q9Y6B7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms