Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA1Q9Y5H4 AP006587.1-201ENST00000534129 1502 ntBASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA1Q9Y5H4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 AC091076.1-201ENST00000610741 619 ntBASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA1Q9Y5H4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA1Q9Y5H4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGA1Q9Y5H4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGA1Q9Y5H4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGA1Q9Y5H4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
PCDHGA1Q9Y5H4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 ECEL1P2-202ENST00000465689 757 ntBASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGA1Q9Y5H4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 AK4P3-201ENST00000418260 669 ntBASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 KRT8P17-201ENST00000453110 1448 ntBASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA1Q9Y5H4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA1Q9Y5H4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms