Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 KRT18P68-201ENST00000392293 1000 ntBASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 C1QBPP2-201ENST00000528754 825 ntBASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 MIR4497-201ENST00000583208 89 ntBASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 AL356652.1-201ENST00000615962 565 ntBASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA4Q9Y5G9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA4Q9Y5G9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA4Q9Y5G9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHGA4Q9Y5G9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA4Q9Y5G9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA4Q9Y5G9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 KRT8P36-201ENST00000489121 1440 ntBASIC19.51■□□□□ 0.71
PCDHGA4Q9Y5G9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 AC105020.6-201ENST00000621523 1217 ntBASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 AC073912.3-201ENST00000624414 853 ntBASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDHGA4Q9Y5G9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 PNMA6B-201ENST00000538162 1200 ntBASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 AL589743.5-201ENST00000616611 1050 ntBASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGA4Q9Y5G9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms