Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 TCF3P1-201ENST00000423021 1937 ntBASIC19.92■□□□□ 0.78
PKP3Q9Y446 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 RNA5SP413-201ENST00000516373 109 ntBASIC19.92■□□□□ 0.78
PKP3Q9Y446 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
PKP3Q9Y446 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP3Q9Y446 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 AL691432.2-201ENST00000607222 2038 ntBASIC19.91■□□□□ 0.78
PKP3Q9Y446 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP3Q9Y446 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.91■□□□□ 0.78
PKP3Q9Y446 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.91■□□□□ 0.78
PKP3Q9Y446 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.9■□□□□ 0.78
PKP3Q9Y446 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 KRT18P6-201ENST00000555540 1265 ntBASIC19.9■□□□□ 0.78
PKP3Q9Y446 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP3Q9Y446 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.9■□□□□ 0.78
PKP3Q9Y446 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PKP3Q9Y446 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PKP3Q9Y446 PCDHAC2-203ENST00000615316 3011 ntBASIC19.89■□□□□ 0.78
PKP3Q9Y446 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
PKP3Q9Y446 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PKP3Q9Y446 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.89■□□□□ 0.77
PKP3Q9Y446 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.89■□□□□ 0.77
PKP3Q9Y446 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP3Q9Y446 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.89■□□□□ 0.77
PKP3Q9Y446 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms