Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 AL512625.2-201ENST00000417533 625 ntBASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 CDCA4P2-201ENST00000441182 718 ntBASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF11Q9Y3C5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 TMEM179-206ENST00000616017 1645 ntBASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF11Q9Y3C5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 AL589743.5-201ENST00000616611 1050 ntBASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 AL158211.5-201ENST00000623583 2518 ntBASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 AP000974.1-201ENST00000623909 2387 ntBASIC19.33■□□□□ 0.68
RNF11Q9Y3C5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 AL137784.2-201ENST00000607332 1000 ntBASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF11Q9Y3C5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 AC133552.2-202ENST00000575694 574 ntBASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 AL031963.3-201ENST00000606441 850 ntBASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 AL050303.2-201ENST00000619798 666 ntBASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF11Q9Y3C5 TNXA-203ENST00000507684 2038 ntBASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 AC004408.2-201ENST00000623613 2777 ntBASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 C2orf69P4-201ENST00000565394 541 ntBASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms