Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 KRT8P20-201ENST00000423953 1409 ntBASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 KRT8P17-201ENST00000453110 1448 ntBASIC18.15■□□□□ 0.5
RPH3AQ9Y2J0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RPH3AQ9Y2J0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 RPS2P4-201ENST00000476944 856 ntBASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 AL031963.3-201ENST00000606441 850 ntBASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPH3AQ9Y2J0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 KRT17P3-201ENST00000420566 1262 ntBASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 AC128676.1-201ENST00000454392 318 ntBASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 AC073648.6-201ENST00000641589 218 ntBASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
RPH3AQ9Y2J0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms