Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NOD1Q9Y239 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NOD1Q9Y239 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 SLC25A3P1-201ENST00000443844 931 ntBASIC21.91■■□□□ 1.1
NOD1Q9Y239 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NOD1Q9Y239 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.91■■□□□ 1.1
NOD1Q9Y239 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.91■■□□□ 1.1
NOD1Q9Y239 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NOD1Q9Y239 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.91■■□□□ 1.1
NOD1Q9Y239 FSCN1P1-201ENST00000568912 1481 ntBASIC21.9■■□□□ 1.1
NOD1Q9Y239 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 C1QL1P1-201ENST00000568105 661 ntBASIC21.9■■□□□ 1.1
NOD1Q9Y239 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 FP700111.2-201ENST00000619190 1892 ntBASIC21.9■■□□□ 1.1
NOD1Q9Y239 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NOD1Q9Y239 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
NOD1Q9Y239 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NOD1Q9Y239 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NOD1Q9Y239 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NOD1Q9Y239 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NOD1Q9Y239 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NOD1Q9Y239 PLK5-205ENST00000642079 1969 ntBASIC21.89■■□□□ 1.09
NOD1Q9Y239 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.89■■□□□ 1.09
NOD1Q9Y239 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.89■■□□□ 1.09
NOD1Q9Y239 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.89■■□□□ 1.09
NOD1Q9Y239 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.89■■□□□ 1.09
NOD1Q9Y239 LIN28AP1-201ENST00000429574 405 ntBASIC21.89■■□□□ 1.09
NOD1Q9Y239 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.89■■□□□ 1.09
NOD1Q9Y239 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 C2orf69P3-201ENST00000565542 1120 ntBASIC21.89■■□□□ 1.09
NOD1Q9Y239 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NOD1Q9Y239 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NOD1Q9Y239 DPP3P2-201ENST00000416030 1696 ntBASIC21.88■■□□□ 1.09
NOD1Q9Y239 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 EP400NL-214ENST00000641289 2402 ntBASIC21.88■■□□□ 1.09
NOD1Q9Y239 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 ATP5G1P1-201ENST00000448724 379 ntBASIC21.88■■□□□ 1.09
NOD1Q9Y239 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.88■■□□□ 1.09
NOD1Q9Y239 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NOD1Q9Y239 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 AC026271.3-201ENST00000571884 352 ntBASIC21.87■■□□□ 1.09
NOD1Q9Y239 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NOD1Q9Y239 AL445675.2-201ENST00000620291 557 ntBASIC21.87■■□□□ 1.09
NOD1Q9Y239 KRT16P6-202ENST00000425692 1426 ntBASIC21.87■■□□□ 1.09
NOD1Q9Y239 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NOD1Q9Y239 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms