Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 NAPSB-206ENST00000562112 1266 ntBASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 LINC00565-201ENST00000562710 2331 ntBASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 FSCN1P1-201ENST00000568912 1481 ntBASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 SLC25A3P1-201ENST00000443844 931 ntBASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC29.67■■■□□ 2.34
SHANK2Q9UPX8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 AC073508.3-201ENST00000619697 1419 ntBASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
SHANK2Q9UPX8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 TUBB8P6-201ENST00000436895 1288 ntBASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SHANK2Q9UPX8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 LINC01568-207ENST00000641790 1380 ntBASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 HLA-A-209ENST00000638375 975 ntBASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC29.64■■■□□ 2.34
SHANK2Q9UPX8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
SHANK2Q9UPX8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHANK2Q9UPX8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
SHANK2Q9UPX8 AC005521.1-201ENST00000393351 872 ntBASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC29.61■■■□□ 2.33
SHANK2Q9UPX8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SHANK2Q9UPX8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms