Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD1Q9UIS9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD1Q9UIS9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.06■□□□□ 0.8
MBD1Q9UIS9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MBD1Q9UIS9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 RBM17P1-201ENST00000453646 1190 ntBASIC20.05■□□□□ 0.8
MBD1Q9UIS9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 MIR6786-201ENST00000616843 113 ntBASIC20.05■□□□□ 0.8
MBD1Q9UIS9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 AC079598.2-202ENST00000546624 1451 ntBASIC20.05■□□□□ 0.8
MBD1Q9UIS9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD1Q9UIS9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 KRT18P35-201ENST00000510488 1269 ntBASIC20.04■□□□□ 0.8
MBD1Q9UIS9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.04■□□□□ 0.8
MBD1Q9UIS9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 NUDT16P1-203ENST00000513809 620 ntBASIC20.03■□□□□ 0.8
MBD1Q9UIS9 AC145285.6-201ENST00000604632 637 ntBASIC20.03■□□□□ 0.8
MBD1Q9UIS9 REXO1L10P-201ENST00000615707 1290 ntBASIC20.03■□□□□ 0.8
MBD1Q9UIS9 AL121906.2-201ENST00000621597 723 ntBASIC20.03■□□□□ 0.8
MBD1Q9UIS9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MBD1Q9UIS9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.02■□□□□ 0.8
MBD1Q9UIS9 AP000525.1-201ENST00000608286 694 ntBASIC20.02■□□□□ 0.8
MBD1Q9UIS9 AP005212.1-201ENST00000581547 1997 ntBASIC20.02■□□□□ 0.8
MBD1Q9UIS9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MBD1Q9UIS9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MBD1Q9UIS9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MBD1Q9UIS9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MBD1Q9UIS9 LINC01006-201ENST00000333319 2292 ntBASIC20.01■□□□□ 0.79
MBD1Q9UIS9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD1Q9UIS9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms