Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 AC004408.2-201ENST00000623613 2777 ntBASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 MIR638-201ENST00000385237 100 ntBASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 AL031963.3-201ENST00000606441 850 ntBASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 AC010536.3-201ENST00000620306 533 ntBASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC42SE2Q9NRR3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CDC42SE2Q9NRR3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CDC42SE2Q9NRR3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
CDC42SE2Q9NRR3 KRT8P20-201ENST00000423953 1409 ntBASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42SE2Q9NRR3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 AC007322.4-201ENST00000509611 723 ntBASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 KRT18P61-201ENST00000585825 1298 ntBASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE2Q9NRR3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms