Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CYLDQ9NQC7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21■□□□□ 0.95
CYLDQ9NQC7 MAX-217ENST00000557277 728 ntTSL 3 BASIC21■□□□□ 0.95
CYLDQ9NQC7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21■□□□□ 0.95
CYLDQ9NQC7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 AC233263.1-201ENST00000578059 224 ntBASIC21■□□□□ 0.95
CYLDQ9NQC7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21■□□□□ 0.95
CYLDQ9NQC7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CYLDQ9NQC7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21■□□□□ 0.95
CYLDQ9NQC7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CYLDQ9NQC7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21■□□□□ 0.95
CYLDQ9NQC7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CYLDQ9NQC7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.99■□□□□ 0.95
CYLDQ9NQC7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 RPS2P52-201ENST00000469610 820 ntBASIC20.98■□□□□ 0.95
CYLDQ9NQC7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 AC066615.1-201ENST00000640911 628 ntBASIC20.98■□□□□ 0.95
CYLDQ9NQC7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CYLDQ9NQC7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 RN7SL471P-201ENST00000580476 299 ntBASIC20.97■□□□□ 0.95
CYLDQ9NQC7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.97■□□□□ 0.95
CYLDQ9NQC7 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.96■□□□□ 0.95
CYLDQ9NQC7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 TCF3P1-201ENST00000423021 1937 ntBASIC20.96■□□□□ 0.95
CYLDQ9NQC7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CYLDQ9NQC7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms