Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 HLA-L-209ENST00000420110 1011 ntBASIC20.49■□□□□ 0.87
PCDH9Q9HC56 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 KRT8P17-201ENST00000453110 1448 ntBASIC20.49■□□□□ 0.87
PCDH9Q9HC56 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH9Q9HC56 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 ID1-201ENST00000376105 1233 ntBASIC20.48■□□□□ 0.87
PCDH9Q9HC56 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH9Q9HC56 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 BX323043.1-201ENST00000641006 1765 ntBASIC20.47■□□□□ 0.87
PCDH9Q9HC56 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 AL031963.3-201ENST00000606441 850 ntBASIC20.47■□□□□ 0.87
PCDH9Q9HC56 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDH9Q9HC56 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 AC005332.7-201ENST00000614046 2005 ntBASIC20.46■□□□□ 0.87
PCDH9Q9HC56 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 AC018445.3-201ENST00000624177 1945 ntBASIC20.46■□□□□ 0.87
PCDH9Q9HC56 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH9Q9HC56 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 AL138781.1-201ENST00000566567 1274 ntBASIC20.45■□□□□ 0.86
PCDH9Q9HC56 MIR4758-201ENST00000577688 71 ntBASIC20.45■□□□□ 0.86
PCDH9Q9HC56 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 AC092118.2-201ENST00000613495 667 ntBASIC20.45■□□□□ 0.86
PCDH9Q9HC56 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH9Q9HC56 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.44■□□□□ 0.86
PCDH9Q9HC56 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH9Q9HC56 KRT16P6-202ENST00000425692 1426 ntBASIC20.44■□□□□ 0.86
PCDH9Q9HC56 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH9Q9HC56 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDH9Q9HC56 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms