Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLK4Q9HAZ1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.27■□□□□ 0.67
CLK4Q9HAZ1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.27■□□□□ 0.67
CLK4Q9HAZ1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLK4Q9HAZ1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLK4Q9HAZ1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLK4Q9HAZ1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.26■□□□□ 0.67
CLK4Q9HAZ1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 AL355472.2-201ENST00000422958 438 ntBASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 AC069152.1-201ENST00000438030 544 ntBASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK4Q9HAZ1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 AL512408.1-201ENST00000569378 2000 ntBASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 KRT17P1-201ENST00000399211 1546 ntBASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLK4Q9HAZ1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms