Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 AC005521.1-201ENST00000393351 872 ntBASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF1Q9H7N4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 KRT18P57-201ENST00000443599 1254 ntBASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC29.42■■■□□ 2.3
SCAF1Q9H7N4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 LINC01960-201ENST00000563759 1884 ntBASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 MMP23A-201ENST00000234610 1017 ntBASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 AC124016.1-201ENST00000609552 612 ntBASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 MIR6786-201ENST00000616843 113 ntBASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC29.41■■■□□ 2.3
SCAF1Q9H7N4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 AC087388.1-201ENST00000571370 1112 ntBASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 NTF6B-201ENST00000591913 560 ntBASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF1Q9H7N4 SMG8-203ENST00000578922 2178 ntBASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 AC239809.2-201ENST00000415381 517 ntBASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC29.39■■■□□ 2.3
SCAF1Q9H7N4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SCAF1Q9H7N4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC29.39■■■□□ 2.29
SCAF1Q9H7N4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
SCAF1Q9H7N4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms