Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PCNX3Q9H6A9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCNX3Q9H6A9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
PCNX3Q9H6A9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.02■□□□□ 0.47
PCNX3Q9H6A9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 PRORSD1P-201ENST00000295112 541 ntBASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.01■□□□□ 0.47
PCNX3Q9H6A9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18■□□□□ 0.47
PCNX3Q9H6A9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18■□□□□ 0.47
PCNX3Q9H6A9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18■□□□□ 0.47
PCNX3Q9H6A9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCNX3Q9H6A9 AL158211.5-201ENST00000623583 2518 ntBASIC18■□□□□ 0.47
PCNX3Q9H6A9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18■□□□□ 0.47
PCNX3Q9H6A9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PCNX3Q9H6A9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 AL121829.2-201ENST00000620908 328 ntBASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 C1QBPP2-201ENST00000528754 825 ntBASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCNX3Q9H6A9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCNX3Q9H6A9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms