Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PIF1Q9H611 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 AC034268.1-201ENST00000441047 882 ntBASIC18.91■□□□□ 0.62
PIF1Q9H611 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 KRT18P14-201ENST00000534205 1250 ntBASIC18.91■□□□□ 0.62
PIF1Q9H611 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.91■□□□□ 0.62
PIF1Q9H611 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.91■□□□□ 0.62
PIF1Q9H611 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PIF1Q9H611 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PIF1Q9H611 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PIF1Q9H611 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.9■□□□□ 0.62
PIF1Q9H611 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.9■□□□□ 0.62
PIF1Q9H611 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.9■□□□□ 0.62
PIF1Q9H611 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PIF1Q9H611 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PIF1Q9H611 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PIF1Q9H611 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PIF1Q9H611 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.89■□□□□ 0.61
PIF1Q9H611 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.89■□□□□ 0.61
PIF1Q9H611 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PIF1Q9H611 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.89■□□□□ 0.61
PIF1Q9H611 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.89■□□□□ 0.61
PIF1Q9H611 AC026271.2-201ENST00000428091 497 ntBASIC18.89■□□□□ 0.61
PIF1Q9H611 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.89■□□□□ 0.61
PIF1Q9H611 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.89■□□□□ 0.61
PIF1Q9H611 RARRES2P6-201ENST00000567333 442 ntBASIC18.89■□□□□ 0.61
PIF1Q9H611 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.89■□□□□ 0.61
PIF1Q9H611 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.89■□□□□ 0.61
PIF1Q9H611 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.89■□□□□ 0.61
PIF1Q9H611 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PIF1Q9H611 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PIF1Q9H611 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PIF1Q9H611 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.88■□□□□ 0.61
PIF1Q9H611 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PIF1Q9H611 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PIF1Q9H611 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.88■□□□□ 0.61
PIF1Q9H611 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PIF1Q9H611 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.88■□□□□ 0.61
PIF1Q9H611 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PIF1Q9H611 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.88■□□□□ 0.61
PIF1Q9H611 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.88■□□□□ 0.61
PIF1Q9H611 KRT18P20-201ENST00000548986 1279 ntBASIC18.88■□□□□ 0.61
PIF1Q9H611 AC243732.1-201ENST00000612648 864 ntBASIC18.88■□□□□ 0.61
PIF1Q9H611 AC004854.2-201ENST00000608450 1441 ntBASIC18.88■□□□□ 0.61
PIF1Q9H611 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PIF1Q9H611 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.88■□□□□ 0.61
PIF1Q9H611 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PIF1Q9H611 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms