Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 TSPY15P-201ENST00000457163 923 ntBASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3LQ9H3M9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 AF186192.3-201ENST00000583427 947 ntBASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 AC004264.1-201ENST00000608354 794 ntBASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3LQ9H3M9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 LINC01023-201ENST00000606054 436 ntBASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3LQ9H3M9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 AL353807.1-201ENST00000427475 662 ntBASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 AL355075.4-201ENST00000554988 638 ntBASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 AC026471.5-201ENST00000615068 467 ntBASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 KRT8P17-201ENST00000453110 1448 ntBASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3LQ9H3M9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 AL355355.2-201ENST00000442321 338 ntBASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN3LQ9H3M9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms