Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.07■□□□□ 0.64
SPTBN4Q9H254 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 AP000523.1-201ENST00000398242 1049 ntBASIC19.06■□□□□ 0.64
SPTBN4Q9H254 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 AP001160.2-201ENST00000596071 487 ntBASIC19.06■□□□□ 0.64
SPTBN4Q9H254 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
SPTBN4Q9H254 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 AC016734.2-201ENST00000624325 1377 ntBASIC19.05■□□□□ 0.64
SPTBN4Q9H254 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 AC012615.1-201ENST00000565797 1299 ntBASIC19.05■□□□□ 0.64
SPTBN4Q9H254 AC055717.3-201ENST00000622967 595 ntBASIC19.05■□□□□ 0.64
SPTBN4Q9H254 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPTBN4Q9H254 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 HLA-G-203ENST00000376818 1127 ntBASIC19.04■□□□□ 0.64
SPTBN4Q9H254 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 AL645929.1-201ENST00000420084 975 ntBASIC19.04■□□□□ 0.64
SPTBN4Q9H254 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 AC142381.3-201ENST00000568208 1670 ntBASIC19.04■□□□□ 0.64
SPTBN4Q9H254 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.04■□□□□ 0.64
SPTBN4Q9H254 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 AC008040.2-201ENST00000461049 708 ntBASIC19.03■□□□□ 0.64
SPTBN4Q9H254 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.03■□□□□ 0.64
SPTBN4Q9H254 NUS1P1-201ENST00000446295 882 ntBASIC19.03■□□□□ 0.64
SPTBN4Q9H254 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPTBN4Q9H254 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 HLA-J-202ENST00000469281 1241 ntBASIC19.02■□□□□ 0.64
SPTBN4Q9H254 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms