Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.94■□□□□ 0.78
CLPBQ9H078 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.94■□□□□ 0.78
CLPBQ9H078 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.94■□□□□ 0.78
CLPBQ9H078 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLPBQ9H078 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.94■□□□□ 0.78
CLPBQ9H078 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.94■□□□□ 0.78
CLPBQ9H078 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.94■□□□□ 0.78
CLPBQ9H078 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.94■□□□□ 0.78
CLPBQ9H078 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLPBQ9H078 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CLPBQ9H078 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLPBQ9H078 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
CLPBQ9H078 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.93■□□□□ 0.78
CLPBQ9H078 UBE2SP1-201ENST00000450587 669 ntBASIC19.93■□□□□ 0.78
CLPBQ9H078 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLPBQ9H078 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.93■□□□□ 0.78
CLPBQ9H078 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.93■□□□□ 0.78
CLPBQ9H078 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.93■□□□□ 0.78
CLPBQ9H078 AC099778.1-201ENST00000568593 1911 ntBASIC19.93■□□□□ 0.78
CLPBQ9H078 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CLPBQ9H078 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.93■□□□□ 0.78
CLPBQ9H078 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.93■□□□□ 0.78
CLPBQ9H078 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.92■□□□□ 0.78
CLPBQ9H078 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 AL391422.3-201ENST00000603791 2761 ntBASIC19.92■□□□□ 0.78
CLPBQ9H078 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.92■□□□□ 0.78
CLPBQ9H078 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.92■□□□□ 0.78
CLPBQ9H078 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.92■□□□□ 0.78
CLPBQ9H078 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.92■□□□□ 0.78
CLPBQ9H078 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.92■□□□□ 0.78
CLPBQ9H078 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
CLPBQ9H078 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLPBQ9H078 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLPBQ9H078 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.92■□□□□ 0.78
CLPBQ9H078 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLPBQ9H078 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.92■□□□□ 0.78
CLPBQ9H078 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLPBQ9H078 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPBQ9H078 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 AC008550.1-201ENST00000511500 884 ntBASIC19.91■□□□□ 0.78
CLPBQ9H078 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPBQ9H078 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 FAM197Y4-202ENST00000622692 608 ntBASIC19.91■□□□□ 0.78
CLPBQ9H078 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLPBQ9H078 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPBQ9H078 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPBQ9H078 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPBQ9H078 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.9■□□□□ 0.78
CLPBQ9H078 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPBQ9H078 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLPBQ9H078 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.9■□□□□ 0.78
CLPBQ9H078 AC005829.2-201ENST00000571422 1056 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms