Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.8■□□□□ 0.6
CNPPD1Q9BV87 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 KRT18P6-201ENST00000555540 1265 ntBASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 AC087289.5-201ENST00000586076 3175 ntBASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNPPD1Q9BV87 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNPPD1Q9BV87 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 TSPY20P-201ENST00000450910 630 ntBASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNPPD1Q9BV87 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNPPD1Q9BV87 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNPPD1Q9BV87 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CNPPD1Q9BV87 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CNPPD1Q9BV87 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CNPPD1Q9BV87 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.77■□□□□ 0.59
CNPPD1Q9BV87 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 AL512408.1-201ENST00000569378 2000 ntBASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 RNA5SP413-201ENST00000516373 109 ntBASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNPPD1Q9BV87 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.75■□□□□ 0.59
CNPPD1Q9BV87 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNPPD1Q9BV87 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms