Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HDHD3Q9BSH5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HDHD3Q9BSH5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HDHD3Q9BSH5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HDHD3Q9BSH5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HDHD3Q9BSH5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 AC009237.14-201ENST00000609975 1594 ntBASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.72■□□□□ 0.27
HDHD3Q9BSH5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 KRT8P17-201ENST00000453110 1448 ntBASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HDHD3Q9BSH5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
HDHD3Q9BSH5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDHD3Q9BSH5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 Z82202.1-201ENST00000623446 1880 ntBASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.69■□□□□ 0.26
HDHD3Q9BSH5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms