Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 AL353807.1-201ENST00000427475 662 ntBASIC19.25■□□□□ 0.67
SLC38A3Q99624 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SLC38A3Q99624 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A3Q99624 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC38A3Q99624 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC38A3Q99624 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC38A3Q99624 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC38A3Q99624 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC38A3Q99624 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A3Q99624 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.23■□□□□ 0.67
SLC38A3Q99624 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 AC073912.3-201ENST00000624414 853 ntBASIC19.23■□□□□ 0.67
SLC38A3Q99624 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC38A3Q99624 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A3Q99624 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 AF186192.3-201ENST00000583427 947 ntBASIC19.22■□□□□ 0.67
SLC38A3Q99624 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SLC38A3Q99624 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A3Q99624 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.21■□□□□ 0.67
SLC38A3Q99624 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC38A3Q99624 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A3Q99624 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A3Q99624 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A3Q99624 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms