Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L2-201ENST00000561772 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 AC138907.5-202ENST00000569484 235 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 AP001160.3-201ENST00000601484 763 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 AC087623.3-201ENST00000607047 1098 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 AC120498.10-201ENST00000621827 505 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L6-201ENST00000626483 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L1-201ENST00000627662 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L8-201ENST00000629013 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L3-201ENST00000630187 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L7-201ENST00000630678 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 DUX4L5-201ENST00000630834 1275 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 POU5F1P4-201ENST00000413175 1085 ntBASIC16.64■□□□□ 0.25
CLCC1Q96S66 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 SLC7A5P2-201ENST00000553010 536 ntBASIC16.64■□□□□ 0.25
CLCC1Q96S66 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCC1Q96S66 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 NEFHP1-201ENST00000412845 2629 ntBASIC16.64■□□□□ 0.25
CLCC1Q96S66 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCC1Q96S66 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCC1Q96S66 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCC1Q96S66 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 AC027702.1-201ENST00000563810 1770 ntBASIC16.62■□□□□ 0.25
CLCC1Q96S66 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 AC097381.1-201ENST00000429019 1296 ntBASIC16.62■□□□□ 0.25
CLCC1Q96S66 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 AC034268.1-201ENST00000441047 882 ntBASIC16.62■□□□□ 0.25
CLCC1Q96S66 AC010141.2-201ENST00000452426 721 ntBASIC16.62■□□□□ 0.25
CLCC1Q96S66 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms