Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 ESRRAP1-201ENST00000400596 1257 ntBASIC16.53■□□□□ 0.24
GAFA1Q96PS6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 AC116351.2-201ENST00000606540 1585 ntBASIC16.52■□□□□ 0.24
GAFA1Q96PS6 PCDHAC2-203ENST00000615316 3011 ntBASIC16.52■□□□□ 0.24
GAFA1Q96PS6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 POM121L13P-201ENST00000422362 380 ntBASIC16.52■□□□□ 0.24
GAFA1Q96PS6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GAFA1Q96PS6 AC018553.1-201ENST00000616682 1458 ntBASIC16.52■□□□□ 0.23
GAFA1Q96PS6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GAFA1Q96PS6 AP001271.2-201ENST00000624018 1556 ntBASIC16.51■□□□□ 0.23
GAFA1Q96PS6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GAFA1Q96PS6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.5■□□□□ 0.23
GAFA1Q96PS6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 TMEM179-206ENST00000616017 1645 ntBASIC16.5■□□□□ 0.23
GAFA1Q96PS6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 AL121906.2-201ENST00000621597 723 ntBASIC16.5■□□□□ 0.23
GAFA1Q96PS6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 AC009237.14-201ENST00000609975 1594 ntBASIC16.5■□□□□ 0.23
GAFA1Q96PS6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GAFA1Q96PS6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GAFA1Q96PS6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms