Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.96■□□□□ 0.95
CALR3Q96L12 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CALR3Q96L12 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.96■□□□□ 0.95
CALR3Q96L12 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.96■□□□□ 0.95
CALR3Q96L12 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CALR3Q96L12 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.96■□□□□ 0.95
CALR3Q96L12 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.96■□□□□ 0.95
CALR3Q96L12 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CALR3Q96L12 AC068338.2-201ENST00000563278 1430 ntBASIC20.95■□□□□ 0.95
CALR3Q96L12 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CALR3Q96L12 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 AC137761.2-201ENST00000561729 223 ntBASIC20.95■□□□□ 0.94
CALR3Q96L12 AC145350.3-201ENST00000569033 163 ntBASIC20.95■□□□□ 0.94
CALR3Q96L12 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.95■□□□□ 0.94
CALR3Q96L12 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.95■□□□□ 0.94
CALR3Q96L12 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.95■□□□□ 0.94
CALR3Q96L12 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 AC069236.1-201ENST00000604339 616 ntBASIC20.95■□□□□ 0.94
CALR3Q96L12 MIR6821-201ENST00000617625 74 ntBASIC20.95■□□□□ 0.94
CALR3Q96L12 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.95■□□□□ 0.94
CALR3Q96L12 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.95■□□□□ 0.94
CALR3Q96L12 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CALR3Q96L12 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CALR3Q96L12 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALR3Q96L12 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.94■□□□□ 0.94
CALR3Q96L12 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.94■□□□□ 0.94
CALR3Q96L12 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.94■□□□□ 0.94
CALR3Q96L12 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CALR3Q96L12 CYP2T3P-201ENST00000601990 817 ntBASIC20.94■□□□□ 0.94
CALR3Q96L12 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALR3Q96L12 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CALR3Q96L12 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.94■□□□□ 0.94
CALR3Q96L12 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.94■□□□□ 0.94
CALR3Q96L12 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.94■□□□□ 0.94
CALR3Q96L12 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CALR3Q96L12 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.93■□□□□ 0.94
CALR3Q96L12 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CALR3Q96L12 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CALR3Q96L12 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.93■□□□□ 0.94
CALR3Q96L12 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.93■□□□□ 0.94
CALR3Q96L12 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CALR3Q96L12 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.93■□□□□ 0.94
CALR3Q96L12 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.93■□□□□ 0.94
CALR3Q96L12 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CALR3Q96L12 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.93■□□□□ 0.94
CALR3Q96L12 PHGDH-210ENST00000641115 1638 ntBASIC20.93■□□□□ 0.94
CALR3Q96L12 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALR3Q96L12 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms