Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 CROCCP3-202ENST00000420820 1947 ntBASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 AP001330.3-201ENST00000520123 633 ntBASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 HCG11-201ENST00000411553 5696 ntBASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP6Q96FZ7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CHMP6Q96FZ7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 AC020763.4-201ENST00000623414 4170 ntBASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 AC005224.4-201ENST00000583262 1652 ntBASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 AL139246.5-201ENST00000606645 996 ntBASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CHMP6Q96FZ7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 AC053503.5-201ENST00000601508 636 ntBASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 AC105233.4-201ENST00000642045 216 ntBASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHMP6Q96FZ7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms