Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 CDV3P1-201ENST00000471403 739 ntBASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 AC011767.1-201ENST00000617410 1153 ntBASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 BID-214ENST00000617586 542 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 AC093484.2-201ENST00000580996 2166 ntBASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 AC007322.4-201ENST00000509611 723 ntBASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 AL591742.1-201ENST00000604433 565 ntBASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN4IP1Q8WWV3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN4IP1Q8WWV3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTN4IP1Q8WWV3 BX119927.1-201ENST00000636596 1552 ntBASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.64■□□□□ 0.25
RTN4IP1Q8WWV3 DUX4L16-201ENST00000555130 1264 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms