Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCD2Q8WV60 UNC93B5-201ENST00000530315 699 ntBASIC20.08■□□□□ 0.81
PTCD2Q8WV60 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 AC009237.14-201ENST00000609975 1594 ntBASIC20.08■□□□□ 0.8
PTCD2Q8WV60 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCD2Q8WV60 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 ESRRAP1-201ENST00000400596 1257 ntBASIC20.07■□□□□ 0.8
PTCD2Q8WV60 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 FAM201B-201ENST00000458407 597 ntBASIC20.07■□□□□ 0.8
PTCD2Q8WV60 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCD2Q8WV60 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCD2Q8WV60 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.05■□□□□ 0.8
PTCD2Q8WV60 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 AC008403.3-201ENST00000598924 454 ntBASIC20.05■□□□□ 0.8
PTCD2Q8WV60 HLA-B-256ENST00000639848 1089 ntBASIC20.05■□□□□ 0.8
PTCD2Q8WV60 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCD2Q8WV60 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 PRORSD1P-201ENST00000295112 541 ntBASIC20.04■□□□□ 0.8
PTCD2Q8WV60 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.04■□□□□ 0.8
PTCD2Q8WV60 AC060766.5-201ENST00000590539 871 ntBASIC20.04■□□□□ 0.8
PTCD2Q8WV60 AC008687.6-201ENST00000596318 630 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms