Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.16■□□□□ 0.82
CHD5Q8TDI0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD5Q8TDI0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.16■□□□□ 0.82
CHD5Q8TDI0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 AC093827.2-201ENST00000512654 315 ntBASIC20.15■□□□□ 0.82
CHD5Q8TDI0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 AL023875.1-201ENST00000640777 796 ntBASIC20.15■□□□□ 0.82
CHD5Q8TDI0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 NBPF21P-201ENST00000425093 1451 ntBASIC20.15■□□□□ 0.82
CHD5Q8TDI0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD5Q8TDI0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CHD5Q8TDI0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 C1QL1P1-201ENST00000568105 661 ntBASIC20.14■□□□□ 0.81
CHD5Q8TDI0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD5Q8TDI0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
CHD5Q8TDI0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 AL158047.1-201ENST00000445918 881 ntBASIC20.12■□□□□ 0.81
CHD5Q8TDI0 KRT16P5-201ENST00000455284 522 ntBASIC20.12■□□□□ 0.81
CHD5Q8TDI0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 AC110285.5-201ENST00000611501 352 ntBASIC20.12■□□□□ 0.81
CHD5Q8TDI0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD5Q8TDI0 AC009237.14-201ENST00000609975 1594 ntBASIC20.12■□□□□ 0.81
CHD5Q8TDI0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms