Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 AC006011.2-201ENST00000621313 1158 ntBASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 AL031985.4-201ENST00000642138 673 ntBASIC27.39■■□□□ 1.98
PMFBP1Q8TBY8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PMFBP1Q8TBY8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
PMFBP1Q8TBY8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
PMFBP1Q8TBY8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
PMFBP1Q8TBY8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 ECEL1P2-202ENST00000465689 757 ntBASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
PMFBP1Q8TBY8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 KRT8P17-201ENST00000453110 1448 ntBASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC27.37■■□□□ 1.97
PMFBP1Q8TBY8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 PPP1R14BP5-201ENST00000440334 435 ntBASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 C1QL1P1-201ENST00000568105 661 ntBASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 AC087388.1-201ENST00000571370 1112 ntBASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC27.36■■□□□ 1.97
PMFBP1Q8TBY8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 INGX-201ENST00000359239 846 ntBASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 AC011506.1-201ENST00000474329 610 ntBASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PMFBP1Q8TBY8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 FSCN1P1-201ENST00000568912 1481 ntBASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC27.34■■□□□ 1.97
PMFBP1Q8TBY8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 PLK5-205ENST00000642079 1969 ntBASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 AP006587.1-201ENST00000534129 1502 ntBASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 B3GAT3P1-201ENST00000471720 806 ntBASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PMFBP1Q8TBY8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
PMFBP1Q8TBY8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PMFBP1Q8TBY8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC27.32■■□□□ 1.96
PMFBP1Q8TBY8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms