Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UBA3Q8TBC4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBA3Q8TBC4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.04■□□□□ 0.96
UBA3Q8TBC4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UBA3Q8TBC4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBA3Q8TBC4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBA3Q8TBC4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBA3Q8TBC4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
UBA3Q8TBC4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
UBA3Q8TBC4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.02■□□□□ 0.95
UBA3Q8TBC4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.01■□□□□ 0.95
UBA3Q8TBC4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 POM121L13P-201ENST00000422362 380 ntBASIC21.01■□□□□ 0.95
UBA3Q8TBC4 POU5F1P3-201ENST00000428824 1078 ntBASIC21.01■□□□□ 0.95
UBA3Q8TBC4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 AC233263.1-201ENST00000578059 224 ntBASIC21.01■□□□□ 0.95
UBA3Q8TBC4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UBA3Q8TBC4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
UBA3Q8TBC4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21■□□□□ 0.95
UBA3Q8TBC4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21■□□□□ 0.95
UBA3Q8TBC4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 ADM-205ENST00000528544 586 ntTSL 2 BASIC21■□□□□ 0.95
UBA3Q8TBC4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21■□□□□ 0.95
UBA3Q8TBC4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21■□□□□ 0.95
UBA3Q8TBC4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21■□□□□ 0.95
UBA3Q8TBC4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBA3Q8TBC4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
UBA3Q8TBC4 PHGDH-210ENST00000641115 1638 ntBASIC21■□□□□ 0.95
UBA3Q8TBC4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21■□□□□ 0.95
UBA3Q8TBC4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBA3Q8TBC4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms