Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 AL355802.2-201ENST00000402069 882 ntBASIC19.36■□□□□ 0.69
CPSF7Q8N684 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 AC007322.1-201ENST00000426983 750 ntBASIC19.36■□□□□ 0.69
CPSF7Q8N684 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 AL050303.2-201ENST00000619798 666 ntBASIC19.36■□□□□ 0.69
CPSF7Q8N684 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.36■□□□□ 0.69
CPSF7Q8N684 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.36■□□□□ 0.69
CPSF7Q8N684 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF7Q8N684 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 KRT18P20-201ENST00000548986 1279 ntBASIC19.35■□□□□ 0.69
CPSF7Q8N684 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF7Q8N684 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF7Q8N684 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 GPX1P1-201ENST00000388829 606 ntBASIC19.34■□□□□ 0.69
CPSF7Q8N684 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPSF7Q8N684 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF7Q8N684 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CPSF7Q8N684 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.33■□□□□ 0.69
CPSF7Q8N684 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF7Q8N684 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.33■□□□□ 0.69
CPSF7Q8N684 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF7Q8N684 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF7Q8N684 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF7Q8N684 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF7Q8N684 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF7Q8N684 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 AC091799.1-201ENST00000422823 811 ntBASIC19.33■□□□□ 0.68
CPSF7Q8N684 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF7Q8N684 SLC7A5P2-201ENST00000553010 536 ntBASIC19.33■□□□□ 0.68
CPSF7Q8N684 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 AC005181.1-201ENST00000604782 1256 ntBASIC19.33■□□□□ 0.68
CPSF7Q8N684 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF7Q8N684 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF7Q8N684 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF7Q8N684 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.33■□□□□ 0.68
CPSF7Q8N684 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPSF7Q8N684 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF7Q8N684 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms