Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 AC026366.1-201ENST00000488803 879 ntBASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB42Q8N4Z0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 AL121906.2-201ENST00000621597 723 ntBASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB42Q8N4Z0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ESRRAP1-201ENST00000400596 1257 ntBASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 FAM201B-201ENST00000458407 597 ntBASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 AC120498.8-201ENST00000614275 531 ntBASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB42Q8N4Z0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 POM121L13P-201ENST00000422362 380 ntBASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 PHGDH-210ENST00000641115 1638 ntBASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB42Q8N4Z0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 RPS2P52-201ENST00000469610 820 ntBASIC19.28■□□□□ 0.68
RAB42Q8N4Z0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms