Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 TERF1P5-201ENST00000477545 1207 ntBASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01561Q8N1V8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 AC098818.2-201ENST00000564925 2320 ntBASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 AP000974.1-201ENST00000623909 2387 ntBASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01561Q8N1V8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 MCRIP2P1-201ENST00000394346 511 ntBASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 AC005837.3-201ENST00000612163 286 ntBASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01561Q8N1V8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01561Q8N1V8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms