Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.64■■□□□ 1.53
DDX60Q8IY21 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
DDX60Q8IY21 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX60Q8IY21 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX60Q8IY21 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX60Q8IY21 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX60Q8IY21 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX60Q8IY21 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.63■■□□□ 1.53
DDX60Q8IY21 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX60Q8IY21 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX60Q8IY21 AL031985.4-201ENST00000642138 673 ntBASIC24.63■■□□□ 1.53
DDX60Q8IY21 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.63■■□□□ 1.53
DDX60Q8IY21 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX60Q8IY21 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX60Q8IY21 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 AL445675.2-201ENST00000620291 557 ntBASIC24.62■■□□□ 1.53
DDX60Q8IY21 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX60Q8IY21 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX60Q8IY21 BX119927.1-201ENST00000636596 1552 ntBASIC24.62■■□□□ 1.53
DDX60Q8IY21 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 DGCR10-201ENST00000609839 495 ntBASIC24.61■■□□□ 1.53
DDX60Q8IY21 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX60Q8IY21 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 KRT18P57-201ENST00000443599 1254 ntBASIC24.61■■□□□ 1.53
DDX60Q8IY21 B3GAT3P1-201ENST00000471720 806 ntBASIC24.61■■□□□ 1.53
DDX60Q8IY21 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX60Q8IY21 FITM1-202ENST00000559294 800 ntBASIC24.61■■□□□ 1.53
DDX60Q8IY21 AC092865.7-201ENST00000641832 219 ntBASIC24.61■■□□□ 1.53
DDX60Q8IY21 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX60Q8IY21 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.6■■□□□ 1.53
DDX60Q8IY21 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DDX60Q8IY21 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX60Q8IY21 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX60Q8IY21 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.59■■□□□ 1.53
DDX60Q8IY21 SLC25A3P1-201ENST00000443844 931 ntBASIC24.59■■□□□ 1.53
DDX60Q8IY21 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.59■■□□□ 1.53
DDX60Q8IY21 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX60Q8IY21 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX60Q8IY21 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DDX60Q8IY21 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX60Q8IY21 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX60Q8IY21 TERF1P1-201ENST00000311003 1181 ntBASIC24.58■■□□□ 1.53
DDX60Q8IY21 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX60Q8IY21 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.58■■□□□ 1.53
DDX60Q8IY21 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX60Q8IY21 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
DDX60Q8IY21 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX60Q8IY21 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX60Q8IY21 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX60Q8IY21 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX60Q8IY21 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.58■■□□□ 1.52
DDX60Q8IY21 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
DDX60Q8IY21 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
DDX60Q8IY21 AC005521.1-201ENST00000393351 872 ntBASIC24.58■■□□□ 1.52
DDX60Q8IY21 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
DDX60Q8IY21 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.58■■□□□ 1.52
DDX60Q8IY21 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms