Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AC091076.1-201ENST00000610741 619 ntBASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 FAM207BP-201ENST00000447172 505 ntBASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AC063952.2-201ENST00000498792 1227 ntBASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VPS13BQ7Z7G8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AP000347.1-202ENST00000435868 847 ntBASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AC093458.2-201ENST00000623150 629 ntBASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 PLK5-205ENST00000642079 1969 ntBASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 AL445675.2-201ENST00000620291 557 ntBASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VPS13BQ7Z7G8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 FAM86EP-206ENST00000510506 987 ntBASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 AC091390.4-202ENST00000476426 537 ntBASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 AC244015.2-201ENST00000616358 1861 ntBASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13BQ7Z7G8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 HMGA1P5-201ENST00000412453 271 ntBASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 HCG4P8-203ENST00000443049 980 ntBASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms