Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDHR3Q6ZTQ4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.9■□□□□ 0.78
CDHR3Q6ZTQ4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CDHR3Q6ZTQ4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDHR3Q6ZTQ4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 MKRN4P-201ENST00000444706 1521 ntBASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 AL512625.2-201ENST00000417533 625 ntBASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 RARRES2P4-201ENST00000514074 484 ntBASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDHR3Q6ZTQ4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDHR3Q6ZTQ4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CDHR3Q6ZTQ4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms