Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 AC005229.4-201ENST00000610085 2198 ntBASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 AC018553.1-201ENST00000616682 1458 ntBASIC21.45■■□□□ 1.02
CNKSR3Q6P9H4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 AC091076.1-201ENST00000610741 619 ntBASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 DPP3P2-201ENST00000416030 1696 ntBASIC21.44■■□□□ 1.02
CNKSR3Q6P9H4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 AC117947.1-201ENST00000427448 529 ntBASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 RCC2P6-201ENST00000526625 1557 ntBASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR3Q6P9H4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 UPK3BP1-201ENST00000428678 509 ntBASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 AC011298.2-201ENST00000617989 482 ntBASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 AL358472.4-201ENST00000633140 710 ntBASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 AC116562.4-202ENST00000641738 218 ntBASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CNKSR3Q6P9H4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 PLK5-205ENST00000642079 1969 ntBASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNKSR3Q6P9H4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 FAM8A6P-201ENST00000407496 1135 ntBASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 AC004951.3-201ENST00000418645 1148 ntBASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 CCR12P-201ENST00000446203 998 ntBASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 AL138966.2-201ENST00000621997 464 ntBASIC21.4■■□□□ 1.02
CNKSR3Q6P9H4 MYC-208ENST00000641036 567 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms