Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL662844.1-201ENST00000546340 181 ntBASIC19.41■□□□□ 0.7
RIF1Q5UIP0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 AC092119.3-201ENST00000612618 583 ntBASIC19.4■□□□□ 0.7
RIF1Q5UIP0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 AC004951.3-201ENST00000418645 1148 ntBASIC19.4■□□□□ 0.7
RIF1Q5UIP0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.4■□□□□ 0.7
RIF1Q5UIP0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIF1Q5UIP0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIF1Q5UIP0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.39■□□□□ 0.7
RIF1Q5UIP0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIF1Q5UIP0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.39■□□□□ 0.69
RIF1Q5UIP0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 AC120114.3-201ENST00000611923 658 ntBASIC19.38■□□□□ 0.69
RIF1Q5UIP0 BX640515.1-201ENST00000617215 977 ntBASIC19.38■□□□□ 0.69
RIF1Q5UIP0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.38■□□□□ 0.69
RIF1Q5UIP0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIF1Q5UIP0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIF1Q5UIP0 AP002383.4-201ENST00000442518 975 ntBASIC19.35■□□□□ 0.69
RIF1Q5UIP0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 STARP1-201ENST00000397973 869 ntBASIC19.35■□□□□ 0.69
RIF1Q5UIP0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIF1Q5UIP0 ZNF444P1-201ENST00000559497 298 ntBASIC19.35■□□□□ 0.69
RIF1Q5UIP0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms