Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.15■■□□□ 1.62
RC3H1Q5TC82 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.14■■□□□ 1.62
RC3H1Q5TC82 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 AC139887.4-201ENST00000607877 719 ntBASIC25.14■■□□□ 1.62
RC3H1Q5TC82 AC011298.2-201ENST00000617989 482 ntBASIC25.14■■□□□ 1.62
RC3H1Q5TC82 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RC3H1Q5TC82 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RC3H1Q5TC82 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RC3H1Q5TC82 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RC3H1Q5TC82 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 KRT16P6-202ENST00000425692 1426 ntBASIC25.13■■□□□ 1.61
RC3H1Q5TC82 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.13■■□□□ 1.61
RC3H1Q5TC82 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 AC004951.3-201ENST00000418645 1148 ntBASIC25.13■■□□□ 1.61
RC3H1Q5TC82 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 HLA-A-209ENST00000638375 975 ntBASIC25.13■■□□□ 1.61
RC3H1Q5TC82 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
RC3H1Q5TC82 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 SLC25A1P2-201ENST00000430693 912 ntBASIC25.12■■□□□ 1.61
RC3H1Q5TC82 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 AC010653.2-201ENST00000623505 997 ntBASIC25.12■■□□□ 1.61
RC3H1Q5TC82 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RC3H1Q5TC82 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 PLK5-205ENST00000642079 1969 ntBASIC25.11■■□□□ 1.61
RC3H1Q5TC82 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 TSPY5P-201ENST00000426936 936 ntBASIC25.11■■□□□ 1.61
RC3H1Q5TC82 MFAP1P1-201ENST00000442257 1255 ntBASIC25.11■■□□□ 1.61
RC3H1Q5TC82 CCR12P-201ENST00000446203 998 ntBASIC25.11■■□□□ 1.61
RC3H1Q5TC82 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.11■■□□□ 1.61
RC3H1Q5TC82 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RC3H1Q5TC82 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms