Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 AC016405.3-201ENST00000607710 860 ntBASIC19.04■□□□□ 0.64
PDCD4Q53EL6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDCD4Q53EL6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDCD4Q53EL6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 AP001271.2-201ENST00000624018 1556 ntBASIC19.02■□□□□ 0.64
PDCD4Q53EL6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.02■□□□□ 0.64
PDCD4Q53EL6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PDCD4Q53EL6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
PDCD4Q53EL6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 KRT8P20-201ENST00000423953 1409 ntBASIC19.01■□□□□ 0.63
PDCD4Q53EL6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 AC100791.3-201ENST00000617619 330 ntBASIC19.01■□□□□ 0.63
PDCD4Q53EL6 AC013268.1-206ENST00000638368 961 ntBASIC19.01■□□□□ 0.63
PDCD4Q53EL6 AC112229.1-201ENST00000639295 961 ntBASIC19.01■□□□□ 0.63
PDCD4Q53EL6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDCD4Q53EL6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms